BO3B

No description specified

Attributes

Name	Type	Description	PID	Unit
Title*	String	Not specified	http://schema.org/name	-
Description	String	Not specified	http://schema.org/description	-
biosafety level	String	Biosafety level of the corresponding sample	http://fairbydesign.nl/ontology/biosafety_level	-
broad-scale environmental context	String	In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). EnvO terms can be found via the link: https://www.ebi.ac.uk/ols4	http://fairbydesign.nl/ontology/broad-scale_environmental_context	-
environmental medium	String	In this field, report which environmental material or materials (pipe separated) immediately surrounded your sample or specimen prior to sampling. EnvO terms can be found via the link: https://www.ebi.ac.uk/ols4	http://fairbydesign.nl/ontology/environmental_medium	-
geographic location (country and/or sea)	String	The geographical origin of the sample as defined by the country or sea. Country or sea names should be chosen from the INSDC country list (http://insdc.org/country.html).	http://fairbydesign.nl/ontology/geographic_location_country_and_or_sea	-
local environmental context	String	In this field, report the entity or entities which are in your sample or specimen‚Äôs local vicinity and which you believe have significant causal influences on your sample or specimen. EnvO terms can be found via the link: https://www.ebi.ac.uk/ols4	http://fairbydesign.nl/ontology/local_environmental_context	-
material	String	Not specified	http://fairbydesign.nl/ontology/material	-
scientific name	String	Name of the organism	http://gbol.life/0.1/scientificName	-
ncbi taxonomy id	String	Taxonomic identifier of the sample according to https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi for example use 2582415 for a blank sample or 1510822 for pig metagenome	http://purl.uniprot.org/core/organism	-
geographic location (latitude)	String	The geographical origin of the sample as defined by latitude. The values should be reported in decimal degrees and in WGS84 system	https://w3id.org/mixs/0000009_lat	-
geographic location (longitude)	String	The geographical origin of the sample as defined by longitude. The values should be reported in decimal degrees and in WGS84 system	https://w3id.org/mixs/0000009_lon	-
collection date	String	The date of sampling, either as an instance (single point in time) or interval. In case no exact time is available, the date/time can be right truncated i.e. all of these are valid ISO8601 compliant times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10; 2008-01-23; 2008-01; 2008.	https://w3id.org/mixs/0000011	-
collection ph	String	Not specified	http://fairbydesign.nl/ontology/collection_ph	-
collection temperature	String	Not specified	http://fairbydesign.nl/ontology/collection_temperature	-
electron acceptor condition	String	Not specified	http://fairbydesign.nl/ontology/electron_acceptor_condition	-
flow rate (l/h)	String	Not specified	http://fairbydesign.nl/ontology/flow_rate_l_h	-
local storage location	String	Not specified	http://fairbydesign.nl/ontology/local_storage_location	-
reactor	String	Not specified	http://fairbydesign.nl/ontology/reactor	-
sample condition	String	Not specified	http://fairbydesign.nl/ontology/sample_condition	-
sample proces key	String	Not specified	http://fairbydesign.nl/ontology/sample_proces_key	-
sample size	String	Not specified	http://fairbydesign.nl/ontology/sample_size	-
sample treatment	String	Treatment applied to the sample	http://fairbydesign.nl/ontology/sample_treatment	-
sample types	String	Not specified	http://fairbydesign.nl/ontology/sample_types	-
sampling strategy	String	Strategy used to perform the sampling procedure	http://fairbydesign.nl/ontology/sampling_strategy	-
solid/liquid	String	Not specified	http://fairbydesign.nl/ontology/solid_liquid	-

Name

Type

Description

PID

Unit

Title*

String

Not specified

http://schema.org/name

Description

String

Not specified

http://schema.org/description

biosafety level

String

Biosafety level of the corresponding sample

http://fairbydesign.nl/ontology/biosafety_level

broad-scale environmental context

String

In this field, report which major environmental system your sample or specimen came from. The systems identified should have a coarse spatial grain, to provide the general environmental context of where the sampling was done (e.g. were you in the desert or a rainforest?). EnvO terms can be found via the link: https://www.ebi.ac.uk/ols4

http://fairbydesign.nl/ontology/broad-scale_environmental_context

environmental medium

String

In this field, report which environmental material or materials (pipe separated) immediately surrounded your sample or specimen prior to sampling. EnvO terms can be found via the link: https://www.ebi.ac.uk/ols4

http://fairbydesign.nl/ontology/environmental_medium

geographic location (country and/or sea)

String

The geographical origin of the sample as defined by the country or sea. Country or sea names should be chosen from the INSDC country list (http://insdc.org/country.html).

http://fairbydesign.nl/ontology/geographic_location_country_and_or_sea

local environmental context

String

In this field, report the entity or entities which are in your sample or specimen‚Äôs local vicinity and which you believe have significant causal influences on your sample or specimen. EnvO terms can be found via the link: https://www.ebi.ac.uk/ols4

http://fairbydesign.nl/ontology/local_environmental_context

material

String

Not specified

http://fairbydesign.nl/ontology/material

scientific name

String

Name of the organism

http://gbol.life/0.1/scientificName

ncbi taxonomy id

String

Taxonomic identifier of the sample according to https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi for example use 2582415 for a blank sample or 1510822 for pig metagenome

http://purl.uniprot.org/core/organism

geographic location (latitude)

String

The geographical origin of the sample as defined by latitude. The values should be reported in decimal degrees and in WGS84 system

https://w3id.org/mixs/0000009_lat

geographic location (longitude)

String

The geographical origin of the sample as defined by longitude. The values should be reported in decimal degrees and in WGS84 system

https://w3id.org/mixs/0000009_lon

collection date

String

The date of sampling, either as an instance (single point in time) or interval. In case no exact time is available, the date/time can be right truncated i.e. all of these are valid ISO8601 compliant times: 2008-01-23T19:23:10+00:00; 2008-01-23T19:23:10; 2008-01-23; 2008-01; 2008.

https://w3id.org/mixs/0000011

collection ph

String

Not specified

http://fairbydesign.nl/ontology/collection_ph

collection temperature

String

Not specified

http://fairbydesign.nl/ontology/collection_temperature

electron acceptor condition

String

Not specified

http://fairbydesign.nl/ontology/electron_acceptor_condition

flow rate (l/h)

String

Not specified

http://fairbydesign.nl/ontology/flow_rate_l_h

local storage location

String

Not specified

http://fairbydesign.nl/ontology/local_storage_location

reactor

String

Not specified

http://fairbydesign.nl/ontology/reactor

sample condition

String

Not specified

http://fairbydesign.nl/ontology/sample_condition

sample proces key

String

Not specified

http://fairbydesign.nl/ontology/sample_proces_key

sample size

String

Not specified

http://fairbydesign.nl/ontology/sample_size

sample treatment

String

Treatment applied to the sample

http://fairbydesign.nl/ontology/sample_treatment

sample types

String

Not specified

http://fairbydesign.nl/ontology/sample_types

sampling strategy

String

Strategy used to perform the sampling procedure

http://fairbydesign.nl/ontology/sampling_strategy

solid/liquid

String

Not specified

http://fairbydesign.nl/ontology/solid_liquid

BO3B

Attributes

Tags

Creator

Submitter

BO3B

Attributes

Tags

Creator

Submitter

Related items