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22 Assays visible to you, out of a total of 57

Signal peptide predictions

Test: An inventory of the aspergillus secretome

No description specified

Submitter: Munazah Andrabi

Assay type: Genomics

Technology type: ChIP-on-chip

Investigation: Understanding the extracellular environment in ...

Study: In silico prediction

Organisms: No organisms

SOPs: No SOPs

Data files: Proteins detected by high-throughput mass spect..., Samples via datafile, samples test again dfile and 1 hidden item

Snapshots: No snapshots

Created: 3rd Mar 2025 at 16:10, Last updated: 7th Mar 2025 at 13:55

MS analysis

Test: An inventory of the aspergillus secretome

No description specified

Submitter: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Understanding the extracellular environment in ...

Study: Validation of the secretome of A. niger

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 6th Mar 2025 at 20:04

Obtain metabolic model

Test: An inventory of the aspergillus secretome

No description specified

Submitter: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Understanding the extracellular environment in ...

Study: Metabolic model analysis

Organisms: No organisms

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 6th Mar 2025 at 20:06

Liquid chromatography tandem mass spectrometric

Test: An inventory of the aspergillus secretome

No description specified

Submitter: Munazah Andrabi

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Understanding the extracellular environment in ...

Study: Culture experiments

Organisms: Aspergillus niger (batch)

SOPs: No SOPs

Data files: No Data files

Snapshots: No snapshots

Created: 7th Mar 2025 at 10:39

Assay - Bac_9-16

Workshop fair data station example

16s Amplicon assay of sample BAC 09.16

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-16_f.fastq.gz, Dataset: Bac_9-16_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:37, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-16_sludge

Workshop fair data station example

16s Amplicon assay of sample BAC 09.16 sludge1

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-16_sludge_f.fastq.gz, Dataset: Bac_9-16_sludge_r.fastq.gz, Dataset: D2021_0024_MERGED_1.fq.gz, Dataset: D2021_0024_MERGED_2.fq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-16_II_sludge

Workshop fair data station example

16s Amplicon assay of sample BAC 09.16 sludge2

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-16_II_sludge_f.fastq.gz, Dataset: Bac_9-16_II_sludge_r.fastq.gz, Dataset: D2021_0024_MERGED_1.fq.gz, Dataset: D2021_0024_MERGED_2.fq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-17

Workshop fair data station example

16s Amplicon assay of sample BAC 09.17

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-17_f.fastq.gz, Dataset: Bac_9-17_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-18

Workshop fair data station example

16s Amplicon assay of sample BAC 09.18

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-18_f.fastq.gz, Dataset: Bac_9-18_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-19

Workshop fair data station example

16s Amplicon assay of sample BAC 09.19

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-19_f.fastq.gz, Dataset: Bac_9-19_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-20

Workshop fair data station example

16s Amplicon assay of sample BAC 09.20

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-20_f.fastq.gz, Dataset: Bac_9-20_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-23

Workshop fair data station example

16s Amplicon assay of sample BAC 09.23

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-23_f.fastq.gz, Dataset: Bac_9-23_r.fastq.gz, Dataset: D20210023_FDDP210180295-1a_H73WNDSX2_L..., Dataset: D20210023_FDDP210180295-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-24

Workshop fair data station example

16s Amplicon assay of sample BAC 09.24

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-24_f.fastq.gz, Dataset: Bac_9-24_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-26

Workshop fair data station example

16s Amplicon assay of sample BAC 09.26

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-26_f.fastq.gz, Dataset: Bac_9-26_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-27

Workshop fair data station example

16s Amplicon assay of sample BAC 09.27

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-27_f.fastq.gz, Dataset: Bac_9-27_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Bac_9-30

Workshop fair data station example

16s Amplicon assay of sample BAC 09.30

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: Bac_9-30_f.fastq.gz, Dataset: Bac_9-30_r.fastq.gz, Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L...

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Neg_PCR_QC_lib-2021_0021

Workshop fair data station example

Negative PCR Quality Control of library 2021_0021

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: D20210021_FDDP210180293-1a_H73WNDSX2_L..., Dataset: D20210021_FDDP210180293-1a_H73WNDSX2_L..., Dataset: Neg_PCR_QC_lib-2021_0021_f.fastq.gz, Dataset: Neg_PCR_QC_lib-2021_0021_r.fastq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Neg_PCR_QC_lib-2021_0022

Workshop fair data station example

Negative PCR Quality Control of library 2021_0022

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: Neg_PCR_QC_lib-2021_0022_f.fastq.gz, Dataset: Neg_PCR_QC_lib-2021_0022_r.fastq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Neg_PCR_QC2_lib-2021_0022

Workshop fair data station example

Negative PCR Quality Control 2 of library 2021_0022

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: D20210022_FDDP210180294-1a_H73WNDSX2_L..., Dataset: Neg_PCR_QC2_lib-2021_0022_f.fastq.gz, Dataset: Neg_PCR_QC2_lib-2021_0022_r.fastq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Neg_PCR_QC_lib-2021_0023

Workshop fair data station example

Negative PCR Quality Control of library 2021_0023

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: D20210023_FDDP210180295-1a_H73WNDSX2_L..., Dataset: D20210023_FDDP210180295-1a_H73WNDSX2_L..., Dataset: Neg_PCR_QC_lib-2021_0023_f.fastq.gz, Dataset: Neg_PCR_QC_lib-2021_0023_r.fastq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Assay - Neg_PCR_QC_lib-2021_0024

Workshop fair data station example

Negative PCR Quality Control of library 2021_0024

Submitter: Jasper Koehorst

Assay type: Experimental Assay Type

Technology type: Technology Type

Investigation: Synergies between biological and ozonisation pr...

Study: Optimizing condutions using bioreactors

Organisms: No organisms

SOPs: No SOPs

Data files: Dataset: D2021_0024_MERGED_1.fq.gz, Dataset: D2021_0024_MERGED_2.fq.gz, Dataset: Neg_PCR_QC_lib-2021_0024_f.fastq.gz, Dataset: Neg_PCR_QC_lib-2021_0024_r.fastq.gz

Snapshots: No snapshots

Created: 7th Mar 2025 at 11:38, Last updated: 7th Mar 2025 at 11:38

Signal Peptide Predictions

An inventory of the Aspergillus niger secretome

No description specified

Submitter: Munazah Andrabi

Assay type: Protein-Protein Interaction Profiling

Technology type: Affinity Chromatography

Investigation: Understanding the extracellular environment in ...

Study: In silico prediction

Organisms: No organisms

SOPs: No SOPs

Data files: Mass Spec, demo: Samples used for the Aspergillus Niger ex...

Snapshots: No snapshots

Created: 7th Mar 2025 at 13:51, Last updated: 7th Mar 2025 at 14:05